Re: JB on the fritz....
In taking the baseplate off and removing and replacing the magnet, you very easily could have broken one of the thin coil wires (not any of the thick wires shown in your pic, none of those are the thin coil wires. The coil wires are the very, very thin copper colored wires which can be seen through the little square window in the bobbin). But you were having problems before this, anyway.
Back to the p/p split switch...
You said..."Pot pushed in was single coil, pot pulled out was HB"...even if you didn't tap on the poles or the pup to check the accuracy of this statement, it's pretty hard to get that sound backwards, even from just listening to it. It's impossible to get the sound of full series humbucker mixed up with its much weaker split tone. But what you describe is exactly opposite relative to the diagram. That CAN'T happen! No matter what color wires you used, no matter if they are incorrectly attached to the thin coil wires inside the pup, IT WILL NOT HAPPEN AS YOU DESCRIBED if you indeed followed the diagram...it is electrically impossible. And for the neck pup to behave in an opposite manner as the bridge ("and exact opposite for the neck pickup") is also electrically IMPOSSIBLE! Can't happen! Ever! No matter what else is wrong with the pickup or any wiring, this won't ever happen if you followed the diagram.
So quit saying..."it is wired correctly to the p/p pot". It isn't. I don't even have to see a picture of it to know that.
However, IF you actually DO have it wired correctly, then there are only two possible explanations:
1) You are deaf and can't hear a thing and just going by intuition when you describe the problem;
2) You are a troll and are just making all of this up and wasting our time.
I just looked at the pic in your first post again. Where is the braided plain silver shield wire?