I've found that certain pickups are prone to love or hate based on which dirt pedal and amp you are using even moreso than whatever wood that the guitar is made from.
...now having said that, a lot of guitars sound good with all sorts of pickups and some guitars sound like crap until you finally...finally get the right pickups in it.
I love the Distortion. Also like the 500t, and worship the ahb3s!
I also like the X2N a lot!
Love/Hate the Dimebucker, alt8, invader depending on what guitar they're in.
Also no love for the custom. Or the 490 and 498...just bleh.
You're not doing anything wrong, freqs are freqs. Everyone likes something different.
I'll save myself much typing and basically agree with all this.
I'll throw in the C-pig with the always love in any guitar I've tried it in. IMO it sits somewhere in-between the distortion and black winter with it's own spin.
The Nazgul I put in with the "guitar-picky" models along with the Super3. Can be love or hate.