Re: String alignment (pic)
2 things come to mind, but not enough for me to totally recommend without other more expert weigh in (jeremy, zerb, others?) ... you could try a trem spaced pickup instead or see about having a new saddle cut with the slot off center to let it line up ... that said, i'd probably just live with it if there is no tonal difference ... in my ibanez 540s, i forgot to order a trem spaced C5 ... once installed, it looked even worse than yours does .. BOTH E strings are WAY off ... but plugged in, i really cant hear any problems when i play
good luck
t4d