Browsing the SE's on Sweetwater, it seems that currently they are all Cor-TEK indonesian guitars with list around 1K. They have glue-on necks, six point trems, PRS branded tuners, and PRS humbuckers.
If you compare that the other Indo and Korean models in the 1K range from Jackson, Schecter, and ESP, it does seem the PRS are lacking in "appointments". For instance with the aforementioned brands, you get neck through construction, 1000 series Floyds, and Seymour Duncan or EMG pickups.
I was going to disagree with GuitarDoc, but it does seem he makes a valid point. The hardware on the PRS SE (at least the current indo versions) do seem to be lacking in appointments. And in fact, for 1000-1200 you can still get Korean build models from Schecter and ESP. (doesn't necessarily mean better, but probably better resale.)