Re: symptoms of toasted pots
The Ibanez site has schematics for download on everything they ever did, also the symptoms of overheated pots are varied and many; You can experience a muffled tone (kinds like a tone pot turned down), an eradic taper, dead pots (opens), shorts, a thin weak sound, never noticed more hum, but I suppose that to is possible as well. Areas to look at would be to recheck your grounds (bridge grounds, cavity shields), and also output jack polarity (as in did you swap the ground to the tip, and the hot to the sleeve).
Some of the old Fender bass schematics showed a brassplate under the pups, that needs to go to ground as well if yours is a similar setup.